J4_7Q0F_001
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UC*GAGUCG*CUAAGUG*UAAA
- Length
- 19 nucleotides
- Bulged bases
- 7Q0F|1|1|U|298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7Q0F_001 not in the Motif Atlas
- Homologous match to J4_8C3A_001
- Geometric discrepancy: 0.047
- The information below is about J4_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q0F|1|1|U|111
7Q0F|1|1|C|112
*
7Q0F|1|1|G|267
7Q0F|1|1|A|268
7Q0F|1|1|G|269
7Q0F|1|1|U|270
7Q0F|1|1|C|271
7Q0F|1|1|G|272
*
7Q0F|1|1|C|293
7Q0F|1|1|U|294
7Q0F|1|1|A|295
7Q0F|1|1|A|296
7Q0F|1|1|G|297
7Q0F|1|1|U|298
7Q0F|1|1|G|299
*
7Q0F|1|1|U|316
7Q0F|1|1|A|317
7Q0F|1|1|A|318
7Q0F|1|1|A|319
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AJ
- 60S ribosomal protein L36
- Chain t
- 60S ribosomal protein L13
- Chain v
- Ribosomal protein L15
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