J4_7QCA_010

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGAG*CG*CC*GUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|G|2374
7QCA|1|L50|G|2375
7QCA|1|L50|A|2376
7QCA|1|L50|G|2377
*
7QCA|1|L50|C|2406
7QCA|1|L50|G|2407
*
7QCA|1|L50|C|2458
7QCA|1|L50|C|2459
*
7QCA|1|L50|G|2495
7QCA|1|L50|U|2496
7QCA|1|L50|C|2497

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LB0

60S ribosomal protein L3

Chain LO0

Ribosomal protein L13A

Chain LV0

Ribosomal protein L23