J4_7QCA_014
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- AGG*CGUAGG*CAGUAAACGAUG*CU
- Length
- 23 nucleotides
- Bulged bases
- 7QCA|1|S60|G|490, 7QCA|1|S60|A|728, 7QCA|1|S60|G|731, 7QCA|1|S60|U|733
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|S60|A|489
7QCA|1|S60|G|490
7QCA|1|S60|G|491
*
7QCA|1|S60|C|677
7QCA|1|S60|G|678
7QCA|1|S60|U|679
7QCA|1|S60|A|680
7QCA|1|S60|G|681
7QCA|1|S60|G|682
*
7QCA|1|S60|C|723
7QCA|1|S60|A|724
7QCA|1|S60|G|725
7QCA|1|S60|U|726
7QCA|1|S60|A|727
7QCA|1|S60|A|728
7QCA|1|S60|A|729
7QCA|1|S60|C|730
7QCA|1|S60|G|731
7QCA|1|S60|A|732
7QCA|1|S60|U|733
7QCA|1|S60|G|734
*
7QCA|1|S60|C|783
7QCA|1|S60|U|784
Current chains
- Chain S60
- RNA SSU
Nearby chains
- Chain SAA
- 40S ribosomal protein S26
- Chain SL0
- 40S ribosomal protein S11
- Chain SN0
- 40S ribosomal protein S13
- Chain SO0
- 40S ribosomal protein S14
- Chain SW0
- 40S ribosomal protein S15A
- Chain SX0
- uS12 SX0
Coloring options: