J4_7QIW_002

3D structure

PDB id

7QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CAAG*CGCC*GAG*CGUCG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIW|1|2|C|183
7QIW|1|2|A|184
7QIW|1|2|A|185
7QIW|1|2|G|186
*
7QIW|1|2|C|202
7QIW|1|2|G|203
7QIW|1|2|C|204
7QIW|1|2|C|205
*
7QIW|1|2|G|209
7QIW|1|2|A|210
7QIW|1|2|G|211
*
7QIW|1|2|C|223
7QIW|1|2|G|224
7QIW|1|2|U|225
7QIW|1|2|C|226
7QIW|1|2|G|227

Current chains

Chain 2

25S rRNA

Nearby chains

Chain F

Ribos_L4_asso_C domain-containing protein

Chain a

KOW domain-containing protein