J4_7QVP_023
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UC*GGUCAG*UC*GGCCGUA
- Length
- 17 nucleotides
- Bulged bases
- 7QVP|1|L6|C|2437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QVP|1|L6|U|2409
7QVP|1|L6|C|2410
*
7QVP|1|L6|G|2434
7QVP|1|L6|G|2435
7QVP|1|L6|U|2436
7QVP|1|L6|C|2437
7QVP|1|L6|A|2438
7QVP|1|L6|G|2439
*
7QVP|1|L6|U|2538
7QVP|1|L6|C|2539
*
7QVP|1|L6|G|2777
7QVP|1|L6|G|2778
7QVP|1|L6|C|2779
7QVP|1|L6|C|2780
7QVP|1|L6|G|2781
7QVP|1|L6|U|2782
7QVP|1|L6|A|2783
Current chains
- Chain L6
- 28S ribosomal RNA
Nearby chains
- Chain L1
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain MR
- 60S ribosomal protein L19
- Chain MX
- 60S ribosomal protein L23a
- Chain Mg
- 60S ribosomal protein L34
- Chain Mh
- 60S ribosomal protein L35
- Chain Mk
- 60S ribosomal protein L38
- Chain Ml
- 60S ribosomal protein L39
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