J4_7QVP_027

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

7QVP|1|L6|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|C|4231
7QVP|1|L6|U|4232
7QVP|1|L6|A|4233
7QVP|1|L6|A|4234
7QVP|1|L6|G|4235
*
7QVP|1|L6|U|4289
7QVP|1|L6|U|4290
7QVP|1|L6|G|4291
*
7QVP|1|L6|C|4318
7QVP|1|L6|C|4319
*
7QVP|1|L6|G|4328
7QVP|1|L6|G|4329
7QVP|1|L6|G|4330

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain MD

60S ribosomal protein L5

Chain MT

60S ribosomal protein L21

Chain Mo

60S ribosomal protein L36a