J4_7QWR_003

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

7QWR|1|5|A|2366, 7QWR|1|5|U|2369, 7QWR|1|5|U|2828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QWR|1|5|C|2365
7QWR|1|5|A|2366
7QWR|1|5|A|2367
7QWR|1|5|A|2368
7QWR|1|5|U|2369
7QWR|1|5|A|2370
7QWR|1|5|U|2371
*
7QWR|1|5|A|2389
7QWR|1|5|G|2390
7QWR|1|5|G|2391
*
7QWR|1|5|C|2824
7QWR|1|5|A|2825
7QWR|1|5|U|2826
7QWR|1|5|G|2827
7QWR|1|5|U|2828
7QWR|1|5|U|2829
*
7QWR|1|5|A|3856
7QWR|1|5|G|3857

Current chains

Chain 5

28S rRNA

Nearby chains

Chain P

60S ribosomal protein L17

Chain R

60S ribosomal protein L19

Chain d

Ribosomal protein L31

Chain u

Isoform 2 of Transcription factor BTF3