3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGUUC*GGUCAG*UC*GGCCGUAC
Length
21 nucleotides
Bulged bases
7QWR|1|5|C|2437
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWR|1|5|G|2406
7QWR|1|5|G|2407
7QWR|1|5|U|2408
7QWR|1|5|U|2409
7QWR|1|5|C|2410
*
7QWR|1|5|G|2434
7QWR|1|5|G|2435
7QWR|1|5|U|2436
7QWR|1|5|C|2437
7QWR|1|5|A|2438
7QWR|1|5|G|2439
*
7QWR|1|5|U|2538
7QWR|1|5|C|2539
*
7QWR|1|5|G|2777
7QWR|1|5|G|2778
7QWR|1|5|C|2779
7QWR|1|5|C|2780
7QWR|1|5|G|2781
7QWR|1|5|U|2782
7QWR|1|5|A|2783
7QWR|1|5|C|2784

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 8
5.8S ribosomal RNA; 5.8S rRNA
Chain R
60S ribosomal protein L19
Chain X
Ribosomal_L23eN domain-containing protein
Chain g
60S ribosomal protein L34
Chain j
Ribosomal protein L37
Chain k
60S ribosomal protein L38
Chain l
Ribosomal protein L39

Coloring options:

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