J4_7RQB_004
3D structure
- PDB id
- 7RQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- GGUUC*GGUUAG*CU*ACCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 7RQB|1|1A|U|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_69051.3
- Basepair signature
- cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7RQB|1|1A|G|1310
7RQB|1|1A|G|1311
7RQB|1|1A|U|1312
7RQB|1|1A|U|1313
7RQB|1|1A|C|1314
*
7RQB|1|1A|G|1338
7RQB|1|1A|G|1339
7RQB|1|1A|U|1340
7RQB|1|1A|U|1341
7RQB|1|1A|A|1342
7RQB|1|1A|G|1343
*
7RQB|1|1A|C|1404
7RQB|1|1A|U|1405
*
7RQB|1|1A|A|1597
7RQB|1|1A|C|1598
7RQB|1|1A|C|1599
7RQB|1|1A|C|1600
7RQB|1|1A|G|1601
7RQB|1|1A|U|1602
7RQB|1|1A|A|1603
7RQB|1|1A|C|1604
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
- Chain 1X
- 50S ribosomal protein L23
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