J4_7RYH_001
3D structure
- PDB id
- 7RYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: Empty 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.43 Å
Loop
- Sequence
- CC*GAGUAG*UGAAUAUG*CAAG
- Length
- 20 nucleotides
- Bulged bases
- 7RYH|1|A|U|404
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7RYH_001 not in the Motif Atlas
- Homologous match to J4_5J7L_018
- Geometric discrepancy: 0.1149
- The information below is about J4_5J7L_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_45801.6
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7RYH|1|A|C|275
7RYH|1|A|C|276
*
7RYH|1|A|G|369
7RYH|1|A|A|370
7RYH|1|A|G|371
7RYH|1|A|U|372
7RYH|1|A|A|373
7RYH|1|A|G|374
*
7RYH|1|A|U|398
7RYH|1|A|G|399
7RYH|1|A|A|400
7RYH|1|A|A|401
7RYH|1|A|U|402
7RYH|1|A|A|403
7RYH|1|A|U|404
7RYH|1|A|G|405
*
7RYH|1|A|C|420
7RYH|1|A|A|421
7RYH|1|A|A|422
7RYH|1|A|G|423
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L9
- Chain W
- 50S ribosomal protein L28
Coloring options: