J4_7SAE_001

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CC*GAGUAC*GGAAUCCG*CAAG

Length

20 nucleotides

Bulged bases

7SAE|1|A|C|452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7SAE_001 not in the Motif Atlas

Homologous match to J4_4WF9_001

Geometric discrepancy: 0.2246

The information below is about J4_4WF9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_94698.1

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW

Number of instances in this motif group

10

Unit IDs

7SAE|1|A|C|271
7SAE|1|A|C|272
*
7SAE|1|A|G|417
7SAE|1|A|A|418
7SAE|1|A|G|419
7SAE|1|A|U|420
7SAE|1|A|A|421
7SAE|1|A|C|422
*
7SAE|1|A|G|446
7SAE|1|A|G|447
7SAE|1|A|A|448
7SAE|1|A|A|449
7SAE|1|A|U|450
7SAE|1|A|C|451
7SAE|1|A|C|452
7SAE|1|A|G|453
*
7SAE|1|A|C|468
7SAE|1|A|A|469
7SAE|1|A|A|470
7SAE|1|A|G|471

Current chains

Chain A

RNA (2434-MER)

Nearby chains