J4_7TOS_005
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 7TOS|1|23S|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7TOS_005 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.1554
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7TOS|1|23S|C|601
7TOS|1|23S|A|602
7TOS|1|23S|A|603
7TOS|1|23S|G|604
*
7TOS|1|23S|C|624
7TOS|1|23S|G|625
7TOS|1|23S|A|626
7TOS|1|23S|A|627
7TOS|1|23S|G|628
*
7TOS|1|23S|C|635
7TOS|1|23S|G|636
7TOS|1|23S|A|637
7TOS|1|23S|G|638
*
7TOS|1|23S|C|650
7TOS|1|23S|G|651
7TOS|1|23S|U|652
7TOS|1|23S|U|653
7TOS|1|23S|A|654
7TOS|1|23S|A|655
7TOS|1|23S|G|656
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L04
- 50S ribosomal protein L4
- Chain L15
- 50S ribosomal protein L15
- Chain L35
- 50S ribosomal protein L35
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