J4_7TTU_002
3D structure
- PDB id
- 7TTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAG*CGUAG*CGAGU*GCGUUUAG
- Length
- 22 nucleotides
- Bulged bases
- 7TTU|1|1|U|698, 7TTU|1|1|U|699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7TTU_002 not in the Motif Atlas
- Homologous match to J4_4WF9_003
- Geometric discrepancy: 0.4202
- The information below is about J4_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7TTU|1|1|C|644
7TTU|1|1|A|645
7TTU|1|1|A|646
7TTU|1|1|G|647
*
7TTU|1|1|C|669
7TTU|1|1|G|670
7TTU|1|1|U|671
7TTU|1|1|A|672
7TTU|1|1|G|673
*
7TTU|1|1|C|680
7TTU|1|1|G|681
7TTU|1|1|A|682
7TTU|1|1|G|683
7TTU|1|1|U|684
*
7TTU|1|1|G|694
7TTU|1|1|C|695
7TTU|1|1|G|696
7TTU|1|1|U|697
7TTU|1|1|U|698
7TTU|1|1|U|699
7TTU|1|1|A|700
7TTU|1|1|G|701
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L35
- Chain S
- 50S ribosomal protein L4
- Chain X
- 50S ribosomal protein L15
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