J4_7TUT_011

3D structure

PDB id

7TUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

7TUT|1|K|U|4677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TUT|1|K|G|4587
7TUT|1|K|U|4588
7TUT|1|K|A|4589
7TUT|1|K|A|4590
*
7TUT|1|K|U|4620
7TUT|1|K|C|4621
*
7TUT|1|K|G|4676
7TUT|1|K|U|4677
7TUT|1|K|G|4678
*
7TUT|1|K|C|4712
7TUT|1|K|G|4713
7TUT|1|K|C|4714
7TUT|1|K|C|4715

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain O

uL13

Chain V

Ribosomal protein L23

Chain w

uL3