3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
CC*GAGUAG*UGAAUAUG*CAAG
Length
20 nucleotides
Bulged bases
7UG7|1|23|U|405
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_7UG7_004 not in the Motif Atlas
Homologous match to J4_5J7L_018
Geometric discrepancy: 0.116
The information below is about J4_5J7L_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_45801.6
Basepair signature
cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
Number of instances in this motif group
7

Unit IDs

7UG7|1|23|C|268
7UG7|1|23|C|269
*
7UG7|1|23|G|370
7UG7|1|23|A|371
7UG7|1|23|G|372
7UG7|1|23|U|373
7UG7|1|23|A|374
7UG7|1|23|G|375
*
7UG7|1|23|U|399
7UG7|1|23|G|400
7UG7|1|23|A|401
7UG7|1|23|A|402
7UG7|1|23|U|403
7UG7|1|23|A|404
7UG7|1|23|U|405
7UG7|1|23|G|406
*
7UG7|1|23|C|421
7UG7|1|23|A|422
7UG7|1|23|A|423
7UG7|1|23|G|424

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LI
50S ribosomal protein L9
Chain Lb
50S ribosomal protein L28

Coloring options:


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