J4_7UNR_012
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGUAAUG*UC*GUAA*UC
- Length
- 16 nucleotides
- Bulged bases
- 7UNR|1|a|U|115
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UNR_012 not in the Motif Atlas
- Homologous match to J4_5J7L_001
- Geometric discrepancy: 0.1737
- The information below is about J4_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_35578.3
- Basepair signature
- cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7UNR|1|a|G|109
7UNR|1|a|A|110
7UNR|1|a|G|111
7UNR|1|a|U|112
7UNR|1|a|A|113
7UNR|1|a|A|114
7UNR|1|a|U|115
7UNR|1|a|G|116
*
7UNR|1|a|U|233
7UNR|1|a|C|234
*
7UNR|1|a|G|280
7UNR|1|a|U|281
7UNR|1|a|A|282
7UNR|1|a|A|283
*
7UNR|1|a|U|305
7UNR|1|a|C|306
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
- Chain q
- 30S ribosomal protein S17
Coloring options: