J4_7UNV_003
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAAG*CGUAG*CGAG*CGUUUAG
- Length
- 20 nucleotides
- Bulged bases
- 7UNV|1|A|U|643, 7UNV|1|A|U|644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UNV_003 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.3443
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7UNV|1|A|C|591
7UNV|1|A|A|592
7UNV|1|A|A|593
7UNV|1|A|G|594
*
7UNV|1|A|C|614
7UNV|1|A|G|615
7UNV|1|A|U|616
7UNV|1|A|A|617
7UNV|1|A|G|618
*
7UNV|1|A|C|625
7UNV|1|A|G|626
7UNV|1|A|A|627
7UNV|1|A|G|628
*
7UNV|1|A|C|640
7UNV|1|A|G|641
7UNV|1|A|U|642
7UNV|1|A|U|643
7UNV|1|A|U|644
7UNV|1|A|A|645
7UNV|1|A|G|646
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain N
- 50S ribosomal protein L15
Coloring options: