J4_7UNW_002
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAAC*GGCC*GUG*CGUAC
- Length
- 17 nucleotides
- Bulged bases
- 7UNW|1|A|U|318
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UNW_002 not in the Motif Atlas
- Homologous match to J4_7A0S_002
- Geometric discrepancy: 0.5759
- The information below is about J4_7A0S_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_71729.5
- Basepair signature
- cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UNW|1|A|G|291
7UNW|1|A|G|292
7UNW|1|A|A|293
7UNW|1|A|A|294
7UNW|1|A|C|295
*
7UNW|1|A|G|310
7UNW|1|A|G|311
7UNW|1|A|C|312
7UNW|1|A|C|313
*
7UNW|1|A|G|317
7UNW|1|A|U|318
7UNW|1|A|G|319
*
7UNW|1|A|C|331
7UNW|1|A|G|332
7UNW|1|A|U|333
7UNW|1|A|A|334
7UNW|1|A|C|335
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain W
- 50S ribosomal protein L24
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