J4_7UPH_011

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

7UPH|1|I|U|3465

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|C|3327
7UPH|1|I|U|3328
7UPH|1|I|2MG|3329
*
7UPH|1|I|C|3399
7UPH|1|I|G|3400
*
7UPH|1|I|C|3418
7UPH|1|I|C|3419
7UPH|1|I|U|3420
7UPH|1|I|A|3421
7UPH|1|I|A|3422
7UPH|1|I|G|3423
7UPH|1|I|G|3424
7UPH|1|I|U|3425
7UPH|1|I|A|3426
7UPH|1|I|G|3427
*
7UPH|1|I|C|3461
7UPH|1|I|G|3462
7UPH|1|I|A|3463
7UPH|1|I|A|3464
7UPH|1|I|U|3465
7UPH|1|I|G|3466

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain K

50S ribosomal protein L2