J4_7UQZ_005
3D structure
- PDB id
- 7UQZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- UC*GGUUAG*CC*GGUCGUA
- Length
- 17 nucleotides
- Bulged bases
- 7UQZ|1|1|U|1523
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UQZ|1|1|U|1495
7UQZ|1|1|C|1496
*
7UQZ|1|1|G|1520
7UQZ|1|1|G|1521
7UQZ|1|1|U|1522
7UQZ|1|1|U|1523
7UQZ|1|1|A|1524
7UQZ|1|1|G|1525
*
7UQZ|1|1|C|1614
7UQZ|1|1|C|1615
*
7UQZ|1|1|G|1829
7UQZ|1|1|G|1830
7UQZ|1|1|U|1831
7UQZ|1|1|C|1832
7UQZ|1|1|G|1833
7UQZ|1|1|U|1834
7UQZ|1|1|A|1835
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain R
- 60S ribosomal protein L19-A
- Chain X
- 60S ribosomal protein L25
- Chain b
- Nucleolar GTP-binding protein 1
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- 60S ribosomal protein L38
- Chain l
- 60S ribosomal protein L39
- Chain n
- Pescadillo homolog
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