J4_7UVY_009
3D structure
- PDB id
- 7UVY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAG*CGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 7UVY|1|A|U|1967
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UVY_009 not in the Motif Atlas
- Homologous match to J4_9DFE_008
- Geometric discrepancy: 0.0982
- The information below is about J4_9DFE_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_42306.2
- Basepair signature
- cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
7UVY|1|A|C|1829
7UVY|1|A|U|1830
7UVY|1|A|G|1831
*
7UVY|1|A|C|1901
7UVY|1|A|G|1902
*
7UVY|1|A|C|1920
7UVY|1|A|C|1921
7UVY|1|A|U|1922
7UVY|1|A|A|1923
7UVY|1|A|A|1924
7UVY|1|A|G|1925
7UVY|1|A|G|1926
7UVY|1|A|U|1927
7UVY|1|A|A|1928
7UVY|1|A|G|1929
*
7UVY|1|A|C|1963
7UVY|1|A|G|1964
7UVY|1|A|A|1965
7UVY|1|A|A|1966
7UVY|1|A|U|1967
7UVY|1|A|G|1968
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Transfer RNA; tRNA
Coloring options: