J4_7UVZ_004
3D structure
- PDB id
- 7UVZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CGACAAA*UC*GCUU*AG
- Length
- 15 nucleotides
- Bulged bases
- 7UVZ|1|A|G|1266, 7UVZ|1|A|A|1267, 7UVZ|1|A|C|1268, 7UVZ|1|A|A|1270, 7UVZ|1|A|U|1645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UVZ_004 not in the Motif Atlas
- Homologous match to J4_5J7L_021
- Geometric discrepancy: 0.0966
- The information below is about J4_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_64571.5
- Basepair signature
- cWW-F-cWW-tSS-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UVZ|1|A|C|1265
7UVZ|1|A|G|1266
7UVZ|1|A|A|1267
7UVZ|1|A|C|1268
7UVZ|1|A|A|1269
7UVZ|1|A|A|1270
7UVZ|1|A|A|1271
*
7UVZ|1|A|U|1289
7UVZ|1|A|C|1290
*
7UVZ|1|A|G|1643
7UVZ|1|A|C|1644
7UVZ|1|A|U|1645
7UVZ|1|A|U|1646
*
7UVZ|1|A|A|2005
7UVZ|1|A|G|2006
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L17
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
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