J4_7Z20_012
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- UUGGC*GCAC*GGGGUCG*UA
- Length
- 18 nucleotides
- Bulged bases
- 7Z20|1|v|U|8, 7Z20|1|v|U|47, 7Z20|1|v|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Z20|1|v|U|7
7Z20|1|v|U|8
7Z20|1|v|G|9
7Z20|1|v|G|10
7Z20|1|v|C|11
*
7Z20|1|v|G|24
7Z20|1|v|C|25
7Z20|1|v|A|26
7Z20|1|v|C|27
*
7Z20|1|v|G|43
7Z20|1|v|G|44
7Z20|1|v|G|45
7Z20|1|v|G|46
7Z20|1|v|U|47
7Z20|1|v|C|48
7Z20|1|v|G|49
*
7Z20|1|v|U|65
7Z20|1|v|A|66
Current chains
- Chain v
- Pro-tRNA
Nearby chains
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain m
- 50S ribosomal protein L16
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