J4_7Z3N_012
3D structure
- PDB id
- 7Z3N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAG*CGAAAG*CCAUAAACUAUG*CU
- Length
- 23 nucleotides
- Bulged bases
- 7Z3N|1|2|A|620, 7Z3N|1|2|A|1024, 7Z3N|1|2|U|1027, 7Z3N|1|2|U|1029
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7Z3N_012 not in the Motif Atlas
- Homologous match to J4_8P9A_022
- Geometric discrepancy: 0.1189
- The information below is about J4_8P9A_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_14595.1
- Basepair signature
- cWW-cWW-cWW-F-F-tHW-F-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
7Z3N|1|2|A|619
7Z3N|1|2|A|620
7Z3N|1|2|G|621
*
7Z3N|1|2|C|973
7Z3N|1|2|G|974
7Z3N|1|2|A|975
7Z3N|1|2|A|976
7Z3N|1|2|A|977
7Z3N|1|2|G|978
*
7Z3N|1|2|C|1019
7Z3N|1|2|C|1020
7Z3N|1|2|A|1021
7Z3N|1|2|U|1022
7Z3N|1|2|A|1023
7Z3N|1|2|A|1024
7Z3N|1|2|A|1025
7Z3N|1|2|C|1026
7Z3N|1|2|U|1027
7Z3N|1|2|A|1028
7Z3N|1|2|U|1029
7Z3N|1|2|G|1030
*
7Z3N|1|2|C|1100
7Z3N|1|2|U|1101
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain Ln
- 60S ribosomal protein L41-A
- Chain Lp
- 60S ribosomal protein L43-like protein
- Chain SL
- 40S ribosomal protein S11-like protein
- Chain SN
- 40S ribosomal protein S13-like protein
- Chain SO
- 40S ribosomal protein S14-like protein
- Chain SW
- 40S ribosomal protein S22-like protein
- Chain SX
- 40S ribosomal protein s23-like protein
- Chain Sa
- 40S ribosomal protein S26
Coloring options: