J4_7Z3O_013

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGGA*UACACUG*CGUGCUGG*CGAGGAA

Length

26 nucleotides

Bulged bases

7Z3O|1|2|U|1469, 7Z3O|1|2|G|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z3O|1|2|U|1165
7Z3O|1|2|G|1166
7Z3O|1|2|G|1167
7Z3O|1|2|A|1168
*
7Z3O|1|2|U|1464
7Z3O|1|2|A|1465
7Z3O|1|2|C|1466
7Z3O|1|2|A|1467
7Z3O|1|2|C|1468
7Z3O|1|2|U|1469
7Z3O|1|2|G|1470
*
7Z3O|1|2|C|1529
7Z3O|1|2|G|1530
7Z3O|1|2|U|1531
7Z3O|1|2|G|1532
7Z3O|1|2|C|1533
7Z3O|1|2|U|1534
7Z3O|1|2|G|1535
7Z3O|1|2|G|1536
*
7Z3O|1|2|C|1567
7Z3O|1|2|G|1568
7Z3O|1|2|A|1569
7Z3O|1|2|G|1570
7Z3O|1|2|G|1571
7Z3O|1|2|A|1572
7Z3O|1|2|A|1573

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SF

40S ribosomal protein s5-like protein

Chain SQ

40S ribosomal protein S16-like protein

Chain SS

Putative ribosomal protein

Chain ST

40S ribosomal protein S19-like protein

Chain SZ

40S ribosomal protein S25