J4_7ZFW_002

3D structure

PDB id

7ZFW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 80S ribosome obtained from ssDNA coated grid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

7ZFW|1|L5|A|218, 7ZFW|1|L5|G|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZFW|1|L5|C|196
7ZFW|1|L5|A|197
7ZFW|1|L5|A|198
7ZFW|1|L5|G|199
*
7ZFW|1|L5|C|215
7ZFW|1|L5|C|216
7ZFW|1|L5|C|217
7ZFW|1|L5|A|218
7ZFW|1|L5|G|219
7ZFW|1|L5|C|220
7ZFW|1|L5|C|221
7ZFW|1|L5|C|222
*
7ZFW|1|L5|G|226
7ZFW|1|L5|A|227
7ZFW|1|L5|C|228
*
7ZFW|1|L5|G|240
7ZFW|1|L5|G|241
7ZFW|1|L5|U|242
7ZFW|1|L5|A|243
7ZFW|1|L5|G|244

Current chains

Chain L5

RNA (615-MER)

Nearby chains