J4_7ZJW_006
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 7ZJW|1|L5|C|2280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJW|1|L5|G|2249
7ZJW|1|L5|G|2250
7ZJW|1|L5|U|2251
7ZJW|1|L5|U|2252
7ZJW|1|L5|C|2253
*
7ZJW|1|L5|G|2277
7ZJW|1|L5|G|2278
7ZJW|1|L5|U|2279
7ZJW|1|L5|C|2280
7ZJW|1|L5|A|2281
7ZJW|1|L5|G|2282
*
7ZJW|1|L5|U|2381
7ZJW|1|L5|C|2382
*
7ZJW|1|L5|G|2620
7ZJW|1|L5|G|2621
7ZJW|1|L5|C|2622
7ZJW|1|L5|C|2623
7ZJW|1|L5|G|2624
7ZJW|1|L5|U|2625
7ZJW|1|L5|A|2626
7ZJW|1|L5|C|2627
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LU
- 60S ribosomal protein L19
- Chain La
- 60S ribosomal protein uL23
- Chain Lj
- 60S ribosomal protein L34
- Chain Lk
- 60S ribosomal protein uL29
- Chain Lm
- 60S ribosomal protein L37
- Chain Ln
- 60S ribosomal protein eL38
- Chain Lo
- 60S ribosomal protein eL39
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