J4_7ZQ5_009
3D structure
- PDB id
- 7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAG*CGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 7ZQ5|1|b|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZQ5_009 not in the Motif Atlas
- Homologous match to J4_9DFE_008
- Geometric discrepancy: 0.104
- The information below is about J4_9DFE_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_93343.1
- Basepair signature
- cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F
- Number of instances in this motif group
- 4
Unit IDs
7ZQ5|1|b|C|1833
7ZQ5|1|b|U|1834
7ZQ5|1|b|G|1835
*
7ZQ5|1|b|C|1905
7ZQ5|1|b|G|1906
*
7ZQ5|1|b|C|1924
7ZQ5|1|b|C|1925
7ZQ5|1|b|U|1926
7ZQ5|1|b|A|1927
7ZQ5|1|b|A|1928
7ZQ5|1|b|G|1929
7ZQ5|1|b|G|1930
7ZQ5|1|b|U|1931
7ZQ5|1|b|A|1932
7ZQ5|1|b|G|1933
*
7ZQ5|1|b|C|1967
7ZQ5|1|b|G|1968
7ZQ5|1|b|A|1969
7ZQ5|1|b|A|1970
7ZQ5|1|b|U|1971
7ZQ5|1|b|G|1972
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: