J4_7ZRS_008
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GACUG*CAUAG*UGAUU*AUUAAC
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZRS_008 not in the Motif Atlas
- Homologous match to J4_8C3A_006
- Geometric discrepancy: 0.0611
- The information below is about J4_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZRS|1|5|G|2131
7ZRS|1|5|A|2132
7ZRS|1|5|C|2133
7ZRS|1|5|U|2134
7ZRS|1|5|G|2135
*
7ZRS|1|5|C|2147
7ZRS|1|5|A|2148
7ZRS|1|5|U|2149
7ZRS|1|5|A|2150
7ZRS|1|5|G|2151
*
7ZRS|1|5|U|2187
7ZRS|1|5|G|2188
7ZRS|1|5|A|2189
7ZRS|1|5|U|2190
7ZRS|1|5|U|2191
*
7ZRS|1|5|A|2318
7ZRS|1|5|U|2319
7ZRS|1|5|U|2320
7ZRS|1|5|A|2321
7ZRS|1|5|A|2322
7ZRS|1|5|C|2323
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain BA
- 60S ribosomal protein L2-A
- Chain Bm
- RPL41A isoform 1
- Chain Bo
- 60S ribosomal protein L43-A
Coloring options: