J4_7ZUX_007

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GG*CU*AG*UC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7ZUX_007 not in the Motif Atlas

Homologous match to J4_8C3A_005

Geometric discrepancy: 0.0701

The information below is about J4_8C3A_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZUX|1|5|G|1675
7ZUX|1|5|G|1676
*
7ZUX|1|5|C|1694
7ZUX|1|5|U|1695
*
7ZUX|1|5|A|1753
7ZUX|1|5|G|1754
*
7ZUX|1|5|U|1773
7ZUX|1|5|C|1774

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain ET

60S ribosomal protein L22-A

Chain Ef

60S ribosomal protein L34-A

Chain Ej

60S ribosomal protein L38