J4_7ZUX_008
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GACUG*CAUAG*UGAUU*AUUAAC
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUX_008 not in the Motif Atlas
- Homologous match to J4_8P9A_017
- Geometric discrepancy: 0.0706
- The information below is about J4_8P9A_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_78485.1
- Basepair signature
- cWW-tSW-F-F-tHS-F-cWW-F-cWW-F-F-tHS-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZUX|1|5|G|2131
7ZUX|1|5|A|2132
7ZUX|1|5|C|2133
7ZUX|1|5|U|2134
7ZUX|1|5|G|2135
*
7ZUX|1|5|C|2147
7ZUX|1|5|A|2148
7ZUX|1|5|U|2149
7ZUX|1|5|A|2150
7ZUX|1|5|G|2151
*
7ZUX|1|5|U|2187
7ZUX|1|5|G|2188
7ZUX|1|5|A|2189
7ZUX|1|5|U|2190
7ZUX|1|5|U|2191
*
7ZUX|1|5|A|2318
7ZUX|1|5|U|2319
7ZUX|1|5|U|2320
7ZUX|1|5|A|2321
7ZUX|1|5|A|2322
7ZUX|1|5|C|2323
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain EA
- 60S ribosomal protein L2-A
- Chain Em
- 60S ribosomal protein L41-A
- Chain Eo
- 60S ribosomal protein L43-A
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