J4_7ZUX_012
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- AUAG*CAG*CGUGUCC*GU
- Length
- 16 nucleotides
- Bulged bases
- 7ZUX|1|6|U|8, 7ZUX|1|6|U|47, 7ZUX|1|6|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUX_012 not in the Motif Atlas
- Homologous match to J4_1IL2_001
- Geometric discrepancy: 0.2514
- The information below is about J4_1IL2_001
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_70449.27
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 53
Unit IDs
7ZUX|1|6|A|7
7ZUX|1|6|U|8
7ZUX|1|6|A|9
7ZUX|1|6|G|10
*
7ZUX|1|6|C|25
7ZUX|1|6|A|26
7ZUX|1|6|G|27
*
7ZUX|1|6|C|43
7ZUX|1|6|G|44
7ZUX|1|6|U|45
7ZUX|1|6|G|46
7ZUX|1|6|U|47
7ZUX|1|6|C|48
7ZUX|1|6|C|49
*
7ZUX|1|6|G|65
7ZUX|1|6|U|66
Current chains
- Chain 6
- A/P tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain EI
- 60S ribosomal protein L10
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