J4_7ZW0_005

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAAAUAU*AG*UGAU*AG

Length

15 nucleotides

Bulged bases

7ZW0|1|LA|A|1452, 7ZW0|1|LA|U|1455

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7ZW0_005 not in the Motif Atlas

Homologous match to J4_8C3A_003

Geometric discrepancy: 0.061

The information below is about J4_8C3A_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZW0|1|LA|C|1451
7ZW0|1|LA|A|1452
7ZW0|1|LA|A|1453
7ZW0|1|LA|A|1454
7ZW0|1|LA|U|1455
7ZW0|1|LA|A|1456
7ZW0|1|LA|U|1457
*
7ZW0|1|LA|A|1475
7ZW0|1|LA|G|1476
*
7ZW0|1|LA|U|1877
7ZW0|1|LA|G|1878
7ZW0|1|LA|A|1879
7ZW0|1|LA|U|1880
*
7ZW0|1|LA|A|2352
7ZW0|1|LA|G|2353

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LS

60S ribosomal protein L17-A

Chain LU

60S ribosomal protein L19-A

Chain Lg

60S ribosomal protein L31-A