J4_8B2L_005
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UC*GGUUAG*CC*GGUCGUA
- Length
- 17 nucleotides
- Bulged bases
- 8B2L|1|A3|U|1534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B2L|1|A3|U|1506
8B2L|1|A3|C|1507
*
8B2L|1|A3|G|1531
8B2L|1|A3|G|1532
8B2L|1|A3|U|1533
8B2L|1|A3|U|1534
8B2L|1|A3|A|1535
8B2L|1|A3|G|1536
*
8B2L|1|A3|C|1619
8B2L|1|A3|C|1620
*
8B2L|1|A3|G|1835
8B2L|1|A3|G|1836
8B2L|1|A3|U|1837
8B2L|1|A3|C|1838
8B2L|1|A3|G|1839
8B2L|1|A3|U|1840
8B2L|1|A3|A|1841
Current chains
- Chain A3
- 25S rRNA
Nearby chains
- Chain B3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain H3
- Ribosomal protein L19
- Chain T3
- 60S ribosomal protein L34
- Chain W3
- 60S ribosomal protein L38
- Chain X3
- 60S ribosomal protein L39-3
- Chain k3
- 60S ribosomal protein L23a
Coloring options: