J4_8B2L_009

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUAAG*UUG*CC*GUG

Length

13 nucleotides

Bulged bases

8B2L|1|A3|A|2660, 8B2L|1|A3|U|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|C|2657
8B2L|1|A3|U|2658
8B2L|1|A3|A|2659
8B2L|1|A3|A|2660
8B2L|1|A3|G|2661
*
8B2L|1|A3|U|2715
8B2L|1|A3|U|2716
8B2L|1|A3|G|2717
*
8B2L|1|A3|C|2744
8B2L|1|A3|C|2745
*
8B2L|1|A3|G|2754
8B2L|1|A3|U|2755
8B2L|1|A3|G|2756

Current chains

Chain A3

25S rRNA

Nearby chains

Chain J3

60S ribosomal protein L21-1-like

Chain Z3

60S ribosomal protein L44

Chain h3

60S ribosomal protein L5-like