J4_8BH6_002

3D structure

PDB id

8BH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 30S ribosomal subunit from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAC*GAUAAUAU*AGUGAAAG*CAC

Length

22 nucleotides

Bulged bases

8BH6|1|a|A|182, 8BH6|1|a|U|183, 8BH6|1|a|A|211, 8BH6|1|a|A|212

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH6|1|a|G|142
8BH6|1|a|A|143
8BH6|1|a|C|144
*
8BH6|1|a|G|178
8BH6|1|a|A|179
8BH6|1|a|U|180
8BH6|1|a|A|181
8BH6|1|a|A|182
8BH6|1|a|U|183
8BH6|1|a|A|184
8BH6|1|a|U|185
*
8BH6|1|a|A|206
8BH6|1|a|G|207
8BH6|1|a|U|208
8BH6|1|a|G|209
8BH6|1|a|A|210
8BH6|1|a|A|211
8BH6|1|a|A|212
8BH6|1|a|G|213
*
8BH6|1|a|C|227
8BH6|1|a|A|228
8BH6|1|a|C|229

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20