J4_8BH6_003
3D structure
- PDB id
- 8BH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mature 30S ribosomal subunit from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCG*CGAAAG*CCGUAAACGAUGA*UCC
- Length
- 25 nucleotides
- Bulged bases
- 8BH6|1|a|C|584, 8BH6|1|a|A|823, 8BH6|1|a|G|826, 8BH6|1|a|U|828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BH6|1|a|G|583
8BH6|1|a|C|584
8BH6|1|a|G|585
*
8BH6|1|a|C|772
8BH6|1|a|G|773
8BH6|1|a|A|774
8BH6|1|a|A|775
8BH6|1|a|A|776
8BH6|1|a|G|777
*
8BH6|1|a|C|818
8BH6|1|a|C|819
8BH6|1|a|G|820
8BH6|1|a|U|821
8BH6|1|a|A|822
8BH6|1|a|A|823
8BH6|1|a|A|824
8BH6|1|a|C|825
8BH6|1|a|G|826
8BH6|1|a|A|827
8BH6|1|a|U|828
8BH6|1|a|G|829
8BH6|1|a|A|830
*
8BH6|1|a|U|888
8BH6|1|a|C|889
8BH6|1|a|C|890
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
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