J4_8BH7_001

3D structure

PDB id

8BH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

4.23 Å

Loop

Sequence

GAGUAACAC*GCU*AUAG*CC

Length

18 nucleotides

Bulged bases

8BH7|1|a|C|120

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH7|1|a|G|114
8BH7|1|a|A|115
8BH7|1|a|G|116
8BH7|1|a|U|117
8BH7|1|a|A|118
8BH7|1|a|A|119
8BH7|1|a|C|120
8BH7|1|a|A|121
8BH7|1|a|C|122
*
8BH7|1|a|G|246
8BH7|1|a|C|247
8BH7|1|a|U|248
*
8BH7|1|a|A|294
8BH7|1|a|U|295
8BH7|1|a|A|296
8BH7|1|a|G|297
*
8BH7|1|a|C|319
8BH7|1|a|C|320

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17