J4_8BR8_005
3D structure
- PDB id
- 8BR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state (A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- UC*GGUGAC*GG*CGCCGUA
- Length
- 17 nucleotides
- Bulged bases
- 8BR8|1|Lt|G|1207
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BR8|1|Lt|U|1179
8BR8|1|Lt|C|1180
*
8BR8|1|Lt|G|1204
8BR8|1|Lt|G|1205
8BR8|1|Lt|U|1206
8BR8|1|Lt|G|1207
8BR8|1|Lt|A|1208
8BR8|1|Lt|C|1209
*
8BR8|1|Lt|G|1287
8BR8|1|Lt|G|1288
*
8BR8|1|Lt|C|1464
8BR8|1|Lt|G|1465
8BR8|1|Lt|C|1466
8BR8|1|Lt|C|1467
8BR8|1|Lt|G|1468
8BR8|1|Lt|U|1469
8BR8|1|Lt|A|1470
Current chains
- Chain Lt
- Large Subunit rRNA
Nearby chains
- Chain LD
- 5.8S rRNA
- Chain LG
- Ribosomal protein L39
- Chain LS
- Ribosomal protein L19
- Chain LY
- Ribosomal protein L23A
- Chain Lh
- Ribosomal protein L34
- Chain Li
- Ribosomal protein L29
- Chain Ll
- Ribosomal L38e
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