J4_8C91_002

3D structure

PDB id

8C91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.19 Å

Loop

Sequence

CC*GAGUAGG*CUGAAUAUGGGG*CUCCAAG

Length

28 nucleotides

Bulged bases

8C91|1|A|U|403, 8C91|1|A|U|405, 8C91|1|A|A|422, 8C91|1|A|A|423

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C91|1|A|C|268
8C91|1|A|C|269
*
8C91|1|A|G|370
8C91|1|A|A|371
8C91|1|A|G|372
8C91|1|A|U|373
8C91|1|A|A|374
8C91|1|A|G|375
8C91|1|A|G|376
*
8C91|1|A|C|398
8C91|1|A|U|399
8C91|1|A|G|400
8C91|1|A|A|401
8C91|1|A|A|402
8C91|1|A|U|403
8C91|1|A|A|404
8C91|1|A|U|405
8C91|1|A|G|406
8C91|1|A|G|407
8C91|1|A|G|408
8C91|1|A|G|409
*
8C91|1|A|C|418
8C91|1|A|U|419
8C91|1|A|C|420
8C91|1|A|C|421
8C91|1|A|A|422
8C91|1|A|A|423
8C91|1|A|G|424

Current chains

Chain A

23S rRNA

Nearby chains