J4_8C93_007

3D structure

PDB id

8C93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

GGGC*GACG*CGGAAG*UGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C93|1|A|G|2643
8C93|1|A|G|2644
8C93|1|A|G|2645
8C93|1|A|C|2646
*
8C93|1|A|G|2674
8C93|1|A|A|2675
8C93|1|A|C|2676
8C93|1|A|G|2677
*
8C93|1|A|C|2730
8C93|1|A|G|2731
8C93|1|A|G|2732
8C93|1|A|A|2733
8C93|1|A|A|2734
8C93|1|A|G|2735
*
8C93|1|A|U|2769
8C93|1|A|G|2770
8C93|1|A|C|2771

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14