J4_8C97_003

3D structure

PDB id

8C97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.07 Å

Loop

Sequence

CAAG*CGAAGGG*CCGAG*CGUUAAG

Length

23 nucleotides

Bulged bases

8C97|1|A|A|654

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C97|1|A|C|601
8C97|1|A|A|602
8C97|1|A|A|603
8C97|1|A|G|604
*
8C97|1|A|C|624
8C97|1|A|G|625
8C97|1|A|A|626
8C97|1|A|A|627
8C97|1|A|G|628
8C97|1|A|G|629
8C97|1|A|G|630
*
8C97|1|A|C|634
8C97|1|A|C|635
8C97|1|A|G|636
8C97|1|A|A|637
8C97|1|A|G|638
*
8C97|1|A|C|650
8C97|1|A|G|651
8C97|1|A|U|652
8C97|1|A|U|653
8C97|1|A|A|654
8C97|1|A|A|655
8C97|1|A|G|656

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4