J4_8CEP_002

3D structure

PDB id

8CEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Round2 30S head (no antibiotic)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8CEP|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CEP|1|A|G|142
8CEP|1|A|A|143
8CEP|1|A|G|144
*
8CEP|1|A|C|178
8CEP|1|A|A|179
8CEP|1|A|U|180
8CEP|1|A|A|181
8CEP|1|A|A|182
8CEP|1|A|C|183
8CEP|1|A|G|184
*
8CEP|1|A|C|193
8CEP|1|A|C|194
8CEP|1|A|A|195
8CEP|1|A|A|196
8CEP|1|A|A|197
8CEP|1|A|G|198
*
8CEP|1|A|U|219
8CEP|1|A|G|220
8CEP|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20