J4_8CSP_001
3D structure
- PDB id
- 8CSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial small subunit assembly intermediate (State A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CAAG*CGUUCCAG*CAC*GAAACAG
- Length
- 22 nucleotides
- Bulged bases
- 8CSP|1|A|A|700, 8CSP|1|A|U|711, 8CSP|1|A|C|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CSP|1|A|C|698
8CSP|1|A|A|699
8CSP|1|A|A|700
8CSP|1|A|G|701
*
8CSP|1|A|C|708
8CSP|1|A|G|709
8CSP|1|A|U|710
8CSP|1|A|U|711
8CSP|1|A|C|712
8CSP|1|A|C|713
8CSP|1|A|A|714
8CSP|1|A|G|715
*
8CSP|1|A|C|800
8CSP|1|A|A|801
8CSP|1|A|C|802
*
8CSP|1|A|G|811
8CSP|1|A|A|812
8CSP|1|A|A|813
8CSP|1|A|A|814
8CSP|1|A|C|815
8CSP|1|A|A|816
8CSP|1|A|G|817
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain 9
- Nitric oxide-associated protein 1
- Chain M
- 28S ribosomal protein S16, mitochondrial
- Chain U
- 28S ribosomal protein S26, mitochondrial
Coloring options: