J4_8EVS_005
3D structure
- PDB id
- 8EVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GG*CUUAAC*GGAAGAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 8EVS|1|A1|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVS|1|A1|G|1674
8EVS|1|A1|G|1675
*
8EVS|1|A1|C|1693
8EVS|1|A1|U|1694
8EVS|1|A1|U|1695
8EVS|1|A1|A|1696
8EVS|1|A1|A|1697
8EVS|1|A1|C|1698
*
8EVS|1|A1|G|1747
8EVS|1|A1|G|1748
8EVS|1|A1|A|1749
8EVS|1|A1|A|1750
8EVS|1|A1|G|1751
8EVS|1|A1|A|1752
8EVS|1|A1|G|1753
*
8EVS|1|A1|U|1772
8EVS|1|A1|C|1773
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AU
- 60S ribosomal protein L22-A
- Chain Ag
- 60S ribosomal protein L34-A
- Chain Ak
- RPL38 isoform 1
Coloring options: