J4_8FL2_004
3D structure
- PDB id
- 8FL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- (OMC)AAAUAU*AGG*(OMC)AUGUU*AG
- Length
- 18 nucleotides
- Bulged bases
- 8FL2|1|L3|A|2366, 8FL2|1|L3|U|2369, 8FL2|1|L3|U|2828
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FL2|1|L3|OMC|2365
8FL2|1|L3|A|2366
8FL2|1|L3|A|2367
8FL2|1|L3|A|2368
8FL2|1|L3|U|2369
8FL2|1|L3|A|2370
8FL2|1|L3|U|2371
*
8FL2|1|L3|A|2389
8FL2|1|L3|G|2390
8FL2|1|L3|G|2391
*
8FL2|1|L3|OMC|2824
8FL2|1|L3|A|2825
8FL2|1|L3|U|2826
8FL2|1|L3|G|2827
8FL2|1|L3|U|2828
8FL2|1|L3|U|2829
*
8FL2|1|L3|A|3856
8FL2|1|L3|G|3857
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L17
- Chain LD
- 60S ribosomal protein L19
- Chain LP
- 60S ribosomal protein L31
- Chain NP
- Zinc finger protein 593
- Chain SR
- GTP-binding protein 4
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