J4_8FL6_002

3D structure

PDB id

8FL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL6|1|L3|C|196
8FL6|1|L3|A|197
8FL6|1|L3|A|198
8FL6|1|L3|G|199
*
8FL6|1|L3|C|215
8FL6|1|L3|C|216
8FL6|1|L3|C|217
8FL6|1|L3|A|218
8FL6|1|L3|G|219
8FL6|1|L3|C|220
8FL6|1|L3|C|221
8FL6|1|L3|C|222
*
8FL6|1|L3|G|226
8FL6|1|L3|A|227
8FL6|1|L3|C|228
*
8FL6|1|L3|G|240
8FL6|1|L3|G|241
8FL6|1|L3|U|242
8FL6|1|L3|A|243
8FL6|1|L3|G|244

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4