J4_8FL6_006

3D structure

PDB id

8FL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8FL6|1|L3|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL6|1|L3|G|2618
8FL6|1|L3|G|2619
*
8FL6|1|L3|U|2637
8FL6|1|L3|G|2638
8FL6|1|L3|U|2639
8FL6|1|L3|G|2640
8FL6|1|L3|A|2641
8FL6|1|L3|A|2642
*
8FL6|1|L3|U|2692
8FL6|1|L3|G|2693
8FL6|1|L3|G|2694
8FL6|1|L3|A|2695
8FL6|1|L3|A|2696
8FL6|1|L3|A|2697
8FL6|1|L3|G|2698
*
8FL6|1|L3|U|2718
8FL6|1|L3|C|2719

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LD

60S ribosomal protein L19

Chain LF

60S ribosomal protein L22

Chain LR

60S ribosomal protein L34

Chain LY

60S ribosomal protein L38