J4_8FL9_002

3D structure

PDB id

8FL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL9|1|L3|C|196
8FL9|1|L3|A|197
8FL9|1|L3|A|198
8FL9|1|L3|G|199
*
8FL9|1|L3|C|215
8FL9|1|L3|C|216
8FL9|1|L3|C|217
8FL9|1|L3|A|218
8FL9|1|L3|G|219
8FL9|1|L3|C|220
8FL9|1|L3|C|221
8FL9|1|L3|C|222
*
8FL9|1|L3|G|226
8FL9|1|L3|A|227
8FL9|1|L3|C|228
*
8FL9|1|L3|G|240
8FL9|1|L3|G|241
8FL9|1|L3|U|242
8FL9|1|L3|A|243
8FL9|1|L3|G|244

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4