J4_8FRU_004
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GGUUC*GGUGACU*AGG*CGCCGUAC
- Length
- 23 nucleotides
- Bulged bases
- 8FRU|1|1|G|1205
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FRU|1|1|G|1174
8FRU|1|1|G|1175
8FRU|1|1|U|1176
8FRU|1|1|U|1177
8FRU|1|1|C|1178
*
8FRU|1|1|G|1202
8FRU|1|1|G|1203
8FRU|1|1|U|1204
8FRU|1|1|G|1205
8FRU|1|1|A|1206
8FRU|1|1|C|1207
8FRU|1|1|U|1208
*
8FRU|1|1|A|1284
8FRU|1|1|G|1285
8FRU|1|1|G|1286
*
8FRU|1|1|C|1462
8FRU|1|1|G|1463
8FRU|1|1|C|1464
8FRU|1|1|C|1465
8FRU|1|1|G|1466
8FRU|1|1|U|1467
8FRU|1|1|A|1468
8FRU|1|1|C|1469
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain 4
- 5.8S rRNA
- Chain R
- 60S ribosomal protein eL19
- Chain X
- 60S ribosomal protein uL23
- Chain g
- 60S ribosomal protein eL34
- Chain h
- 60S ribosomal protein uL29
- Chain j
- 60S ribosomal protein eL37
- Chain k
- 60S ribosomal protein eL38
- Chain l
- 60S ribosomal protein eL39
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